GALAXY workshop - Introduction to Galaxy: a step towards cutting-edge research

This introductory course work aims to make the participants familiar with Galaxy web platform through introducing some basic bioinformatics workflows used for RNA-seq data analysis; Create own customized bioinformatic pipelines in Galaxy will also be taught in the course.

Introduction to Galaxy: a step towards cutting-edge research

3rd May, 2019, FFWS, CZU, Prague.

Proposed course contents with the putative time schedule:

Introductory session: 9:00 am – 10:15 am

  • ELIXIR for Czech researchers.
  • Familiarize yourself with the basics of Galaxy and its facilities.
  • Creating accounts and personal workspace

Coffee break: 10:15 am – 10:30 am

Before lunch session: 10:30 am - 12:30 pm

  • Learn how to obtain data from external sources.
  • Learn how to run tools.
  • Learn how histories work.
  • Learn how to create a workflow.
  • Learn how to share your work.
  • Learn how to install the necessary software.

After lunch session: 1:45 pm - 5:00 pm (Coffee break 3.15 pm – 3.35 pm)

  • Introduction to bioinformatic workflows (basic RNAseq).
  • Necessary contacts for support.
  • Joining to support forum for Galaxy.

Closing ceremony (5:30 pm- 6:00 pm) 

CZU participants mail to Dr. Roy for book the place before 30th April.

Participants need to bring their own laptops for the course.

Please note, we are not providing lunch.

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